Chris Collins

Areas / Learning

Chemistry

Chemistry for makers and engineers.

Exploration ·

Why sourdough rises

A jar of flour and water raises a loaf with no packet of yeast. Follow it from the microbes in the starter, through temperature, time, water and gluten, to the oven — with the sourdough, bread and artisan-bread tools open beside the text.

ChemistryLife

Tool ·

Ocean lab

Predict tides from NOAA harmonic constituents and check them against NOAA's own predictions; solve the wave dispersion relation, grow wind waves, shoal and break them; compute TEOS-10 seawater properties with a T–S diagram and CTD profiles; work out Coriolis, Ekman and geostrophic currents; and plot NDBC buoy observations.

PhysicsChemistry

Tool ·

Chemistry: formulas and the periodic table

Molar mass and percent composition from any formula (hydrates, ions, nested brackets), mass ↔ moles ↔ particles, empirical formulas, an equation balancer that handles ionic and redox equations, an interactive periodic table, and electrochemistry: galvanic cell EMF from standard electrode potentials and Faraday's law for plating and corrosion.

ChemistryBiology and medicine

Tool ·

Isotope patterns and exact mass

Monoisotopic, average, and nominal mass for any formula; the isotope distribution as a stick spectrum at unit or fine resolution; m/z for common ESI adducts; and ppm mass error.

Chemistry

Tool ·

Molecule viewer (SMILES)

Type a SMILES string, a molecular formula or a name (about 630 molecules built in, plus PubChem search) to draw the 2D structure and get the formula, masses, rings, H-bond donors and acceptors, rotatable bonds, TPSA, cLogP and the Lipinski and Veber rules — plus, with RDKit in WebAssembly, canonical SMILES, InChI/InChIKey, exact descriptors, SMARTS substructure search and fingerprint similarity. Load a protein from the Protein Data Bank by ID (1A3N haemoglobin, 4INS insulin) in 3-D and export it as an STL for printing.

ChemistryBiology and medicine

Tool ·

Solutions and lab maths

Make up solutions by weight, convert between molarity, % w/v, % w/w, ppm, molality and normality, plan dilutions and serial dilutions, calculate pH, design buffers, solve the ideal gas law and limiting-reagent problems, work out osmolarity and tonicity (van 't Hoff factor, permeant solutes), and do the available-chlorine arithmetic for disinfectant tablets.

ChemistryBiology and medicine

Tool ·

Spectroscopy and calibration curves

Beer–Lambert solver with absorbance ↔ transmittance, a calibration-curve fitter (linear, through zero, or quadratic) with R², LOD/LOQ and back-calculated unknowns, and light conversions between wavelength, wavenumber, frequency, and photon energy with the visible colour.

Chemistry

Tool ·

Thermochemistry

Reaction enthalpy, entropy and Gibbs free energy from standard formation data, with ΔG and K against temperature, Hess's law solved automatically, ΔG° ↔ K and van 't Hoff, calorimetry, and bond-enthalpy estimates.

Chemistry

Tool ·

Titration curves

Simulate acid–base titration curves exactly for strong, weak, polyprotic, and mixed acids and bases, find equivalence and half-equivalence points and buffer regions, choose an indicator by titration error, and analyse your own pH-meter data by derivative and Gran plots.

Chemistry